Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.73■□□□□ 0.75
SIX4Q9UIU6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 AL162741.1-201ENST00000565563 1558 ntBASIC19.73■□□□□ 0.75
SIX4Q9UIU6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SIX4Q9UIU6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 AL645929.1-201ENST00000420084 975 ntBASIC19.72■□□□□ 0.75
SIX4Q9UIU6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 LINC01126-201ENST00000623515 1646 ntBASIC19.72■□□□□ 0.75
SIX4Q9UIU6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SIX4Q9UIU6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 RNF126P1-202ENST00000569893 925 ntBASIC19.71■□□□□ 0.75
SIX4Q9UIU6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.71■□□□□ 0.75
SIX4Q9UIU6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 AP000550.4-202ENST00000639755 178 ntBASIC19.7■□□□□ 0.74
SIX4Q9UIU6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SIX4Q9UIU6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms