Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 AC018470.1-201ENST00000624790 3129 ntBASIC18.82■□□□□ 0.6
UBP1Q9NZI7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.82■□□□□ 0.6
UBP1Q9NZI7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.82■□□□□ 0.6
UBP1Q9NZI7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.81■□□□□ 0.6
UBP1Q9NZI7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 KRT8P50-201ENST00000562022 1438 ntBASIC18.81■□□□□ 0.6
UBP1Q9NZI7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBP1Q9NZI7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 AC135050.7-201ENST00000624508 2218 ntBASIC18.8■□□□□ 0.6
UBP1Q9NZI7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 KRT18P23-201ENST00000435622 1283 ntBASIC18.8■□□□□ 0.6
UBP1Q9NZI7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBP1Q9NZI7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.79■□□□□ 0.6
UBP1Q9NZI7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms