Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CISHQ9NSE2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CISHQ9NSE2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CISHQ9NSE2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CISHQ9NSE2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.7■□□□□ 0.74
CISHQ9NSE2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CISHQ9NSE2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CISHQ9NSE2 SDHAP2-201ENST00000455183 2001 ntBASIC19.7■□□□□ 0.74
CISHQ9NSE2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.7■□□□□ 0.74
CISHQ9NSE2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.7■□□□□ 0.74
CISHQ9NSE2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CISHQ9NSE2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.7■□□□□ 0.74
CISHQ9NSE2 MIR149-201ENST00000384879 89 ntBASIC19.7■□□□□ 0.74
CISHQ9NSE2 AK4P3-201ENST00000418260 669 ntBASIC19.7■□□□□ 0.74
CISHQ9NSE2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CISHQ9NSE2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CISHQ9NSE2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.7■□□□□ 0.74
CISHQ9NSE2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.7■□□□□ 0.74
CISHQ9NSE2 AL157888.1-201ENST00000631930 593 ntBASIC19.7■□□□□ 0.74
CISHQ9NSE2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CISHQ9NSE2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.7■□□□□ 0.74
CISHQ9NSE2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CISHQ9NSE2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CISHQ9NSE2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CISHQ9NSE2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.7■□□□□ 0.74
CISHQ9NSE2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CISHQ9NSE2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 AC009102.3-201ENST00000623118 1491 ntBASIC19.69■□□□□ 0.74
CISHQ9NSE2 RNF152P1-201ENST00000397754 604 ntBASIC19.69■□□□□ 0.74
CISHQ9NSE2 TSPY5P-201ENST00000426936 936 ntBASIC19.69■□□□□ 0.74
CISHQ9NSE2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CISHQ9NSE2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CISHQ9NSE2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.68■□□□□ 0.74
CISHQ9NSE2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CISHQ9NSE2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CISHQ9NSE2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.68■□□□□ 0.74
CISHQ9NSE2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.68■□□□□ 0.74
CISHQ9NSE2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.68■□□□□ 0.74
CISHQ9NSE2 AC009065.1-201ENST00000564055 1225 ntBASIC19.68■□□□□ 0.74
CISHQ9NSE2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.68■□□□□ 0.74
CISHQ9NSE2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.68■□□□□ 0.74
CISHQ9NSE2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CISHQ9NSE2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CISHQ9NSE2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CISHQ9NSE2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.67■□□□□ 0.74
CISHQ9NSE2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.67■□□□□ 0.74
CISHQ9NSE2 FAM210CP-201ENST00000445714 574 ntBASIC19.67■□□□□ 0.74
CISHQ9NSE2 AC034232.1-201ENST00000506026 1064 ntBASIC19.67■□□□□ 0.74
CISHQ9NSE2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
CISHQ9NSE2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CISHQ9NSE2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms