Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AP003071.4-201ENST00000562276 1284 ntBASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 AP000692.2-201ENST00000608391 879 ntBASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTPS2Q9NRF8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 AC073592.3-201ENST00000625118 1834 ntBASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 CKBP1-201ENST00000565489 1086 ntBASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CTPS2Q9NRF8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.21■□□□□ 0.34
CTPS2Q9NRF8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 KRT8P32-201ENST00000512863 1461 ntBASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 AL357033.4-201ENST00000617703 1807 ntBASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 SLC25A1P4-201ENST00000567977 778 ntBASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 MIR4785-201ENST00000585005 73 ntBASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 DGCR10-201ENST00000609839 495 ntBASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 NOC2LP1-202ENST00000452600 2235 ntBASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTPS2Q9NRF8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms