Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 AC004870.1-201ENST00000315132 882 ntBASIC19.1■□□□□ 0.65
HPS4Q9NQG7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 AC005332.3-201ENST00000589904 676 ntBASIC19.1■□□□□ 0.65
HPS4Q9NQG7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 AC034236.2-201ENST00000606662 1610 ntBASIC19.1■□□□□ 0.65
HPS4Q9NQG7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.1■□□□□ 0.65
HPS4Q9NQG7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 FDX1P1-201ENST00000449115 551 ntBASIC19.09■□□□□ 0.65
HPS4Q9NQG7 TOB2P1-201ENST00000469761 992 ntBASIC19.09■□□□□ 0.65
HPS4Q9NQG7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 AP000867.3-201ENST00000524675 377 ntBASIC19.09■□□□□ 0.65
HPS4Q9NQG7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 AL390719.2-201ENST00000606993 987 ntBASIC19.09■□□□□ 0.65
HPS4Q9NQG7 IFNL4P1-201ENST00000607083 540 ntBASIC19.09■□□□□ 0.65
HPS4Q9NQG7 AL732292.2-201ENST00000609649 430 ntBASIC19.09■□□□□ 0.65
HPS4Q9NQG7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 FP475955.4-201ENST00000623131 1990 ntBASIC19.09■□□□□ 0.65
HPS4Q9NQG7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 AC141586.3-201ENST00000562166 1838 ntBASIC19.09■□□□□ 0.65
HPS4Q9NQG7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HPS4Q9NQG7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.08■□□□□ 0.65
HPS4Q9NQG7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HPS4Q9NQG7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HPS4Q9NQG7 AC116562.4-201ENST00000641316 2276 ntBASIC19.08■□□□□ 0.65
HPS4Q9NQG7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
HPS4Q9NQG7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HPS4Q9NQG7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HPS4Q9NQG7 HCG11-201ENST00000411553 5696 ntBASIC19.08■□□□□ 0.65
HPS4Q9NQG7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 TSPY19P-201ENST00000418461 509 ntBASIC19.08■□□□□ 0.64
HPS4Q9NQG7 TSPY18P-201ENST00000441642 509 ntBASIC19.08■□□□□ 0.64
HPS4Q9NQG7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 AP003733.1-201ENST00000491725 852 ntBASIC19.08■□□□□ 0.64
HPS4Q9NQG7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS4Q9NQG7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms