Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 AC131212.4-201ENST00000623606 975 ntBASIC16.72■□□□□ 0.27
HINT3Q9NQE9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 RCC2P3-201ENST00000418112 1537 ntBASIC16.71■□□□□ 0.27
HINT3Q9NQE9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 AP002982.1-201ENST00000492365 877 ntBASIC16.71■□□□□ 0.27
HINT3Q9NQE9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 AL049637.2-201ENST00000641778 930 ntBASIC16.71■□□□□ 0.27
HINT3Q9NQE9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 AC134043.2-201ENST00000624206 2238 ntBASIC16.71■□□□□ 0.27
HINT3Q9NQE9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HINT3Q9NQE9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HINT3Q9NQE9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HINT3Q9NQE9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 HCG11-201ENST00000411553 5696 ntBASIC16.7■□□□□ 0.26
HINT3Q9NQE9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 AC020916.1-201ENST00000587762 1774 ntBASIC16.7■□□□□ 0.26
HINT3Q9NQE9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 AC091390.4-202ENST00000476426 537 ntBASIC16.7■□□□□ 0.26
HINT3Q9NQE9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 AF186192.3-201ENST00000583427 947 ntBASIC16.7■□□□□ 0.26
HINT3Q9NQE9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 AC138028.4-201ENST00000564984 1845 ntBASIC16.7■□□□□ 0.26
HINT3Q9NQE9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HINT3Q9NQE9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms