Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC52A3Q9NQ40 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 AF186192.3-201ENST00000583427 947 ntBASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 AC099343.3-201ENST00000605834 2503 ntBASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC52A3Q9NQ40 AC009053.2-201ENST00000563701 2365 ntBASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 AC080080.1-201ENST00000625121 2420 ntBASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 AL353807.1-201ENST00000427475 662 ntBASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 AC096733.2-201ENST00000609937 1394 ntBASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC52A3Q9NQ40 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC52A3Q9NQ40 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC52A3Q9NQ40 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms