Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSU72Q9NP77 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.35■□□□□ 0.53
SSU72Q9NP77 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSU72Q9NP77 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSU72Q9NP77 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.34■□□□□ 0.53
SSU72Q9NP77 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 PP12613-201ENST00000424958 2230 ntBASIC18.34■□□□□ 0.53
SSU72Q9NP77 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.34■□□□□ 0.53
SSU72Q9NP77 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 PCDHA12-202ENST00000613593 2588 ntBASIC18.34■□□□□ 0.53
SSU72Q9NP77 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.34■□□□□ 0.53
SSU72Q9NP77 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.34■□□□□ 0.53
SSU72Q9NP77 AC004980.1-204ENST00000429707 299 ntBASIC18.34■□□□□ 0.53
SSU72Q9NP77 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.34■□□□□ 0.53
SSU72Q9NP77 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SSU72Q9NP77 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSU72Q9NP77 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.34■□□□□ 0.53
SSU72Q9NP77 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSU72Q9NP77 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSU72Q9NP77 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SSU72Q9NP77 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SSU72Q9NP77 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.33■□□□□ 0.53
SSU72Q9NP77 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SSU72Q9NP77 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSU72Q9NP77 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSU72Q9NP77 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.33■□□□□ 0.53
SSU72Q9NP77 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSU72Q9NP77 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSU72Q9NP77 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSU72Q9NP77 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSU72Q9NP77 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSU72Q9NP77 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 AC141586.5-201ENST00000624546 2050 ntBASIC18.33■□□□□ 0.52
SSU72Q9NP77 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSU72Q9NP77 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.33■□□□□ 0.52
SSU72Q9NP77 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SSU72Q9NP77 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSU72Q9NP77 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.32■□□□□ 0.52
SSU72Q9NP77 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.32■□□□□ 0.52
SSU72Q9NP77 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSU72Q9NP77 MIR564-202ENST00000385049 94 ntBASIC18.32■□□□□ 0.52
SSU72Q9NP77 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.32■□□□□ 0.52
SSU72Q9NP77 KRT16P5-201ENST00000455284 522 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms