Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.28■□□□□ 0.36
VCX3AQ9NNX9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 FEM1AP3-201ENST00000403722 1741 ntBASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 AC063926.3-201ENST00000624734 5658 ntBASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 AC012414.1-201ENST00000556676 535 ntBASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VCX3AQ9NNX9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.27■□□□□ 0.35
VCX3AQ9NNX9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 AP001160.3-201ENST00000601484 763 ntBASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VCX3AQ9NNX9 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 AC008764.7-201ENST00000593779 1081 ntBASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 MIR4466-201ENST00000606121 54 ntBASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms