Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 ATP5G2P1-201ENST00000433580 426 ntBASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 LINC01311-201ENST00000565162 1445 ntBASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR1BQ9H9Y6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 HYMAI.1-201ENST00000620949 238 ntBASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 AL390961.4-201ENST00000623958 2535 ntBASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR1BQ9H9Y6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 AL032819.2-201ENST00000624543 2162 ntBASIC18.27■□□□□ 0.51
POLR1BQ9H9Y6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 GCSHP2-201ENST00000560971 527 ntBASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 AC020916.1-201ENST00000587762 1774 ntBASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
POLR1BQ9H9Y6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.25■□□□□ 0.51
POLR1BQ9H9Y6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.25■□□□□ 0.51
POLR1BQ9H9Y6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR1BQ9H9Y6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR1BQ9H9Y6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR1BQ9H9Y6 AL133373.2-201ENST00000623187 2828 ntBASIC18.25■□□□□ 0.51
POLR1BQ9H9Y6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.25■□□□□ 0.51
POLR1BQ9H9Y6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR1BQ9H9Y6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR1BQ9H9Y6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
POLR1BQ9H9Y6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR1BQ9H9Y6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms