Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 AL162741.1-201ENST00000565563 1558 ntBASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 AC079602.3-201ENST00000623931 403 ntBASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNDIG1Q9H7V2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 KRT18P1-202ENST00000452408 1331 ntBASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 AC008556.1-201ENST00000610908 2040 ntBASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 AC016734.2-201ENST00000624325 1377 ntBASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNDIG1Q9H7V2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 AC111152.3-201ENST00000569699 673 ntBASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 MIR3917-201ENST00000580971 93 ntBASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 AC116562.4-201ENST00000641316 2276 ntBASIC18.03■□□□□ 0.48
SYNDIG1Q9H7V2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms