Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AC034236.2-201ENST00000606662 1610 ntBASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 AC008040.2-201ENST00000461049 708 ntBASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 HCG11-201ENST00000411553 5696 ntBASIC18.76■□□□□ 0.59
PHACTR1Q9C0D0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 AL096828.2-201ENST00000567259 1965 ntBASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHACTR1Q9C0D0 KRT8P50-201ENST00000562022 1438 ntBASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 SIRPAP1-201ENST00000448467 1770 ntBASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHACTR1Q9C0D0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 AC096733.2-201ENST00000609937 1394 ntBASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 AL023284.2-201ENST00000405850 579 ntBASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 B3GAT3P1-201ENST00000471720 806 ntBASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 AP000692.2-201ENST00000608391 879 ntBASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 AC008622.2-201ENST00000617006 1229 ntBASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.73■□□□□ 0.59
PHACTR1Q9C0D0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 MCCD1P1-208ENST00000445732 328 ntBASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms