Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.96■□□□□ 0.31
COPS4Q9BT78 TSPY21P-201ENST00000433481 731 ntBASIC16.96■□□□□ 0.31
COPS4Q9BT78 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.96■□□□□ 0.31
COPS4Q9BT78 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.96■□□□□ 0.31
COPS4Q9BT78 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.96■□□□□ 0.31
COPS4Q9BT78 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.96■□□□□ 0.31
COPS4Q9BT78 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
COPS4Q9BT78 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPS4Q9BT78 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.96■□□□□ 0.31
COPS4Q9BT78 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS4Q9BT78 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS4Q9BT78 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.96■□□□□ 0.31
COPS4Q9BT78 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.96■□□□□ 0.31
COPS4Q9BT78 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.96■□□□□ 0.31
COPS4Q9BT78 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS4Q9BT78 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPS4Q9BT78 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
COPS4Q9BT78 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.96■□□□□ 0.31
COPS4Q9BT78 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS4Q9BT78 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS4Q9BT78 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COPS4Q9BT78 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
COPS4Q9BT78 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COPS4Q9BT78 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COPS4Q9BT78 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.96■□□□□ 0.3
COPS4Q9BT78 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.95■□□□□ 0.3
COPS4Q9BT78 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 KRT18P16-201ENST00000510337 1294 ntBASIC16.95■□□□□ 0.3
COPS4Q9BT78 PRKY-204ENST00000533551 1019 ntBASIC16.95■□□□□ 0.3
COPS4Q9BT78 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS4Q9BT78 AC093677.2-201ENST00000600169 1863 ntBASIC16.95■□□□□ 0.3
COPS4Q9BT78 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
COPS4Q9BT78 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.94■□□□□ 0.3
COPS4Q9BT78 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS4Q9BT78 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms