Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.34■□□□□ 0.69
SMOQ99835 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SMOQ99835 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.34■□□□□ 0.69
SMOQ99835 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.34■□□□□ 0.69
SMOQ99835 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.34■□□□□ 0.69
SMOQ99835 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.34■□□□□ 0.69
SMOQ99835 AC011498.5-201ENST00000592027 486 ntBASIC19.34■□□□□ 0.69
SMOQ99835 AC024563.2-201ENST00000603282 481 ntBASIC19.34■□□□□ 0.69
SMOQ99835 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.34■□□□□ 0.69
SMOQ99835 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SMOQ99835 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.34■□□□□ 0.69
SMOQ99835 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.34■□□□□ 0.69
SMOQ99835 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.34■□□□□ 0.69
SMOQ99835 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.34■□□□□ 0.69
SMOQ99835 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMOQ99835 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SMOQ99835 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMOQ99835 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMOQ99835 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.33■□□□□ 0.69
SMOQ99835 AL024508.2-201ENST00000607749 1894 ntBASIC19.33■□□□□ 0.69
SMOQ99835 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.33■□□□□ 0.69
SMOQ99835 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SMOQ99835 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.33■□□□□ 0.69
SMOQ99835 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMOQ99835 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
SMOQ99835 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMOQ99835 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMOQ99835 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMOQ99835 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMOQ99835 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.33■□□□□ 0.68
SMOQ99835 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SMOQ99835 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.33■□□□□ 0.68
SMOQ99835 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.33■□□□□ 0.68
SMOQ99835 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.33■□□□□ 0.68
SMOQ99835 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.33■□□□□ 0.68
SMOQ99835 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.33■□□□□ 0.68
SMOQ99835 WIZP1-201ENST00000531444 2299 ntBASIC19.33■□□□□ 0.68
SMOQ99835 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.33■□□□□ 0.68
SMOQ99835 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.33■□□□□ 0.68
SMOQ99835 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMOQ99835 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
SMOQ99835 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.32■□□□□ 0.68
SMOQ99835 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SMOQ99835 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SMOQ99835 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SMOQ99835 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.32■□□□□ 0.68
SMOQ99835 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.32■□□□□ 0.68
SMOQ99835 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 KRT18P48-201ENST00000434763 852 ntBASIC19.32■□□□□ 0.68
SMOQ99835 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.32■□□□□ 0.68
SMOQ99835 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.32■□□□□ 0.68
SMOQ99835 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.32■□□□□ 0.68
SMOQ99835 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.32■□□□□ 0.68
SMOQ99835 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SMOQ99835 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.32■□□□□ 0.68
SMOQ99835 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMOQ99835 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.32■□□□□ 0.68
SMOQ99835 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMOQ99835 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMOQ99835 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.31■□□□□ 0.68
SMOQ99835 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMOQ99835 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.31■□□□□ 0.68
SMOQ99835 AL138781.2-201ENST00000617896 1843 ntBASIC19.31■□□□□ 0.68
SMOQ99835 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMOQ99835 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMOQ99835 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.31■□□□□ 0.68
SMOQ99835 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.31■□□□□ 0.68
SMOQ99835 AP003733.1-201ENST00000491725 852 ntBASIC19.31■□□□□ 0.68
SMOQ99835 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.31■□□□□ 0.68
SMOQ99835 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.31■□□□□ 0.68
SMOQ99835 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMOQ99835 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SMOQ99835 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.31■□□□□ 0.68
SMOQ99835 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMOQ99835 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMOQ99835 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMOQ99835 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms