Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 NOC2LP1-202ENST00000452600 2235 ntBASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 INGX-201ENST00000359239 846 ntBASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 AC012306.2-201ENST00000609350 630 ntBASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 AC010653.2-201ENST00000623505 997 ntBASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 AL512353.2-201ENST00000448759 1962 ntBASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NUDCD1Q96RS6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 AP003041.3-201ENST00000527151 707 ntBASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 AC097493.4-201ENST00000641197 219 ntBASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUDCD1Q96RS6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 KRT18P22-201ENST00000402024 1347 ntBASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 AC211429.1-201ENST00000415277 523 ntBASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 NOC2LP2-201ENST00000407594 1944 ntBASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 KRT8P32-201ENST00000512863 1461 ntBASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUDCD1Q96RS6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms