Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 AP003041.3-201ENST00000527151 707 ntBASIC17.53■□□□□ 0.4
BBS4Q96RK4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 MIR3180-5-201ENST00000583743 153 ntBASIC17.53■□□□□ 0.4
BBS4Q96RK4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 AL023803.3-201ENST00000615559 522 ntBASIC17.53■□□□□ 0.4
BBS4Q96RK4 AC116562.4-202ENST00000641738 218 ntBASIC17.53■□□□□ 0.4
BBS4Q96RK4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
BBS4Q96RK4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BBS4Q96RK4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BBS4Q96RK4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BBS4Q96RK4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BBS4Q96RK4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.52■□□□□ 0.4
BBS4Q96RK4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BBS4Q96RK4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
BBS4Q96RK4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BBS4Q96RK4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.52■□□□□ 0.4
BBS4Q96RK4 AC093827.2-201ENST00000512654 315 ntBASIC17.52■□□□□ 0.4
BBS4Q96RK4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.52■□□□□ 0.4
BBS4Q96RK4 AL353719.1-201ENST00000566847 864 ntBASIC17.52■□□□□ 0.4
BBS4Q96RK4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.52■□□□□ 0.4
BBS4Q96RK4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.52■□□□□ 0.4
BBS4Q96RK4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.52■□□□□ 0.4
BBS4Q96RK4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.52■□□□□ 0.4
BBS4Q96RK4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
BBS4Q96RK4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BBS4Q96RK4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.52■□□□□ 0.39
BBS4Q96RK4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
BBS4Q96RK4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.52■□□□□ 0.39
BBS4Q96RK4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.52■□□□□ 0.39
BBS4Q96RK4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BBS4Q96RK4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.52■□□□□ 0.39
BBS4Q96RK4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BBS4Q96RK4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
BBS4Q96RK4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.52■□□□□ 0.39
BBS4Q96RK4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 AC034236.2-201ENST00000606662 1610 ntBASIC17.51■□□□□ 0.39
BBS4Q96RK4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 AC036111.1-201ENST00000533973 1582 ntBASIC17.51■□□□□ 0.39
BBS4Q96RK4 BX088651.1-201ENST00000540551 451 ntBASIC17.51■□□□□ 0.39
BBS4Q96RK4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
BBS4Q96RK4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BBS4Q96RK4 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.51■□□□□ 0.39
BBS4Q96RK4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms