Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 AC093503.3-201ENST00000624917 2352 ntBASIC19.03■□□□□ 0.64
RPRD1AQ96P16 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 HYMAI.1-201ENST00000620949 238 ntBASIC19.02■□□□□ 0.64
RPRD1AQ96P16 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPRD1AQ96P16 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPRD1AQ96P16 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPRD1AQ96P16 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RPRD1AQ96P16 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RPRD1AQ96P16 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPRD1AQ96P16 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 AC079602.3-201ENST00000623931 403 ntBASIC19.01■□□□□ 0.63
RPRD1AQ96P16 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPRD1AQ96P16 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RPRD1AQ96P16 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19■□□□□ 0.63
RPRD1AQ96P16 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 HBZP1-201ENST00000354915 429 ntBASIC19■□□□□ 0.63
RPRD1AQ96P16 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19■□□□□ 0.63
RPRD1AQ96P16 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19■□□□□ 0.63
RPRD1AQ96P16 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19■□□□□ 0.63
RPRD1AQ96P16 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19■□□□□ 0.63
RPRD1AQ96P16 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19■□□□□ 0.63
RPRD1AQ96P16 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19■□□□□ 0.63
RPRD1AQ96P16 AL136038.4-201ENST00000603606 1261 ntBASIC19■□□□□ 0.63
RPRD1AQ96P16 AC083849.1-201ENST00000615227 514 ntBASIC19■□□□□ 0.63
RPRD1AQ96P16 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19■□□□□ 0.63
RPRD1AQ96P16 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19■□□□□ 0.63
RPRD1AQ96P16 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RPRD1AQ96P16 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RPRD1AQ96P16 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RPRD1AQ96P16 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPRD1AQ96P16 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19■□□□□ 0.63
RPRD1AQ96P16 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 AC004408.2-201ENST00000623613 2777 ntBASIC18.99■□□□□ 0.63
RPRD1AQ96P16 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPRD1AQ96P16 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms