Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 GPR32P1-201ENST00000601788 811 ntBASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 KRT18P23-201ENST00000435622 1283 ntBASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 AC096582.2-201ENST00000510860 516 ntBASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 AC012640.2-201ENST00000561606 901 ntBASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 AC093028.1-201ENST00000622998 982 ntBASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CNTNAP3BQ96NU0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 FEM1AP1-201ENST00000431297 1995 ntBASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 AC011840.4-201ENST00000578471 627 ntBASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 AL606495.2-201ENST00000605867 535 ntBASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNTNAP3BQ96NU0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.59■□□□□ 0.41
CNTNAP3BQ96NU0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms