Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00479Q96M42 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 TNRC18P3-201ENST00000441896 2691 ntBASIC14.12□□□□□ -0.15
LINC00479Q96M42 AC008556.1-201ENST00000610908 2040 ntBASIC14.12□□□□□ -0.15
LINC00479Q96M42 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 AC120498.8-201ENST00000614275 531 ntBASIC14.12□□□□□ -0.15
LINC00479Q96M42 HLA-A-209ENST00000638375 975 ntBASIC14.12□□□□□ -0.15
LINC00479Q96M42 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00479Q96M42 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00479Q96M42 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 KRT8P41-201ENST00000533985 1514 ntBASIC14.11□□□□□ -0.15
LINC00479Q96M42 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.11□□□□□ -0.15
LINC00479Q96M42 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 KRT8P32-201ENST00000512863 1461 ntBASIC14.11□□□□□ -0.15
LINC00479Q96M42 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
LINC00479Q96M42 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00479Q96M42 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms