Protein–RNA interactions for Protein: Q96LY2

CCDC74B, Coiled-coil domain-containing protein 74B, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC74BQ96LY2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 NSUN5P1-202ENST00000421140 1535 ntBASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 NSUN5P2-203ENST00000457352 1529 ntBASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC74BQ96LY2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 AC091607.1-201ENST00000490318 1060 ntBASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 AP005901.3-202ENST00000581653 237 ntBASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC74BQ96LY2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 MIR149-201ENST00000384879 89 ntBASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 NUS1P2-201ENST00000417358 873 ntBASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 AC011840.4-201ENST00000578471 627 ntBASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 AC104692.2-201ENST00000603054 253 ntBASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 AL353801.3-201ENST00000609898 542 ntBASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC74BQ96LY2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 MINOS1P3-201ENST00000457048 203 ntBASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC74BQ96LY2 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms