Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 AC092338.2-201ENST00000568827 1415 ntBASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 AC116407.4-201ENST00000623319 1061 ntBASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 AL023973.1-201ENST00000624619 620 ntBASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPGRIP1Q96KN7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 AC012313.10-201ENST00000623509 926 ntBASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 ZNF815P-204ENST00000434898 1737 ntBASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 AP000997.3-201ENST00000623333 2250 ntBASIC20.36■□□□□ 0.85
RPGRIP1Q96KN7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 AL441883.1-201ENST00000566170 1045 ntBASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RPGRIP1Q96KN7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 TSPY17P-201ENST00000450329 467 ntBASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 AL512604.3-201ENST00000569583 964 ntBASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 HLA-A-209ENST00000638375 975 ntBASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 AC018553.1-201ENST00000616682 1458 ntBASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms