Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 SDHAP2-201ENST00000455183 2001 ntBASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCD1Q96GM5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCD1Q96GM5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCD1Q96GM5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 UPK3BP1-201ENST00000428678 509 ntBASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 AC024563.2-201ENST00000603282 481 ntBASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 AC099343.3-201ENST00000605834 2503 ntBASIC19.39■□□□□ 0.69
SMARCD1Q96GM5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 KRT18P48-201ENST00000434763 852 ntBASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCD1Q96GM5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.37■□□□□ 0.69
SMARCD1Q96GM5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms