Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF183Q96D59 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF183Q96D59 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF183Q96D59 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF183Q96D59 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF183Q96D59 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
RNF183Q96D59 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF183Q96D59 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF183Q96D59 MYC-208ENST00000641036 567 ntBASIC13.69□□□□□ -0.22
RNF183Q96D59 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF183Q96D59 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF183Q96D59 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
RNF183Q96D59 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
RNF183Q96D59 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF183Q96D59 TNRC18P3-201ENST00000441896 2691 ntBASIC13.69□□□□□ -0.22
RNF183Q96D59 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RNF183Q96D59 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF183Q96D59 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
RNF183Q96D59 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF183Q96D59 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RNF183Q96D59 GPAT2P1-201ENST00000444924 1672 ntBASIC13.69□□□□□ -0.22
RNF183Q96D59 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF183Q96D59 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF183Q96D59 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF183Q96D59 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RNF183Q96D59 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF183Q96D59 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF183Q96D59 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RNF183Q96D59 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
RNF183Q96D59 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF183Q96D59 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF183Q96D59 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF183Q96D59 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
RNF183Q96D59 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF183Q96D59 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RNF183Q96D59 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.68□□□□□ -0.22
RNF183Q96D59 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF183Q96D59 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RNF183Q96D59 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF183Q96D59 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF183Q96D59 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF183Q96D59 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF183Q96D59 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RNF183Q96D59 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF183Q96D59 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
RNF183Q96D59 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RNF183Q96D59 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF183Q96D59 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF183Q96D59 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.67□□□□□ -0.22
RNF183Q96D59 AL031133.1-201ENST00000406807 723 ntBASIC13.67□□□□□ -0.22
RNF183Q96D59 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.67□□□□□ -0.22
RNF183Q96D59 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF183Q96D59 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF183Q96D59 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF183Q96D59 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.67□□□□□ -0.22
RNF183Q96D59 MIR3180-5-201ENST00000583743 153 ntBASIC13.67□□□□□ -0.22
RNF183Q96D59 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.67□□□□□ -0.22
RNF183Q96D59 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.67□□□□□ -0.22
RNF183Q96D59 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
RNF183Q96D59 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF183Q96D59 AP000997.3-201ENST00000623333 2250 ntBASIC13.67□□□□□ -0.22
RNF183Q96D59 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms