Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SHC3Q92529 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHC3Q92529 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.71■□□□□ 0.75
SHC3Q92529 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.7■□□□□ 0.74
SHC3Q92529 GMCL1P1-201ENST00000463439 1581 ntBASIC19.7■□□□□ 0.74
SHC3Q92529 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SHC3Q92529 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.7■□□□□ 0.74
SHC3Q92529 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SHC3Q92529 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 ECEL1P3-201ENST00000427961 737 ntBASIC19.7■□□□□ 0.74
SHC3Q92529 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.7■□□□□ 0.74
SHC3Q92529 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.7■□□□□ 0.74
SHC3Q92529 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.7■□□□□ 0.74
SHC3Q92529 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.7■□□□□ 0.74
SHC3Q92529 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 NEK4P2-201ENST00000580004 1012 ntBASIC19.7■□□□□ 0.74
SHC3Q92529 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.7■□□□□ 0.74
SHC3Q92529 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.7■□□□□ 0.74
SHC3Q92529 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC3Q92529 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC3Q92529 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.69■□□□□ 0.74
SHC3Q92529 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.69■□□□□ 0.74
SHC3Q92529 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.69■□□□□ 0.74
SHC3Q92529 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.69■□□□□ 0.74
SHC3Q92529 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SHC3Q92529 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.69■□□□□ 0.74
SHC3Q92529 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SHC3Q92529 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.69■□□□□ 0.74
SHC3Q92529 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.69■□□□□ 0.74
SHC3Q92529 AC010240.3-201ENST00000607688 395 ntBASIC19.69■□□□□ 0.74
SHC3Q92529 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.69■□□□□ 0.74
SHC3Q92529 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.69■□□□□ 0.74
SHC3Q92529 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.69■□□□□ 0.74
SHC3Q92529 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SHC3Q92529 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SHC3Q92529 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC3Q92529 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SHC3Q92529 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
SHC3Q92529 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SHC3Q92529 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
SHC3Q92529 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
SHC3Q92529 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SHC3Q92529 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.68■□□□□ 0.74
SHC3Q92529 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.68■□□□□ 0.74
SHC3Q92529 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.68■□□□□ 0.74
SHC3Q92529 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC3Q92529 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.68■□□□□ 0.74
SHC3Q92529 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
SHC3Q92529 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SHC3Q92529 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC3Q92529 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHC3Q92529 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SHC3Q92529 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC3Q92529 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms