Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 AL136162.1-201ENST00000607711 1078 ntBASIC12.5□□□□□ -0.41
COPS9Q8WXC6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS9Q8WXC6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 HES2-205ENST00000487437 968 ntTSL 3 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 AC097376.2-205ENST00000610159 5334 ntBASIC12.49□□□□□ -0.41
COPS9Q8WXC6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.49□□□□□ -0.41
COPS9Q8WXC6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 TFP1-202ENST00000475455 1573 ntBASIC12.48□□□□□ -0.41
COPS9Q8WXC6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 AD000864.1-201ENST00000624076 2295 ntBASIC12.48□□□□□ -0.41
COPS9Q8WXC6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 TESC-206ENST00000541210 936 ntTSL 3 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 AC024257.2-201ENST00000549699 147 ntBASIC12.48□□□□□ -0.41
COPS9Q8WXC6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
COPS9Q8WXC6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms