Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 MTMR9LP-203ENST00000426597 1545 ntBASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 AL162741.1-201ENST00000565563 1558 ntBASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 AC073508.3-201ENST00000619697 1419 ntBASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLL1Q8TB92 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 AL138966.2-201ENST00000621997 464 ntBASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 KRT8P45-201ENST00000414328 1447 ntBASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
HMGCLL1Q8TB92 AC008556.1-201ENST00000610908 2040 ntBASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 TERF1P1-201ENST00000311003 1181 ntBASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 MIR564-202ENST00000385049 94 ntBASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGCLL1Q8TB92 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms