Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 AC008556.1-201ENST00000610908 2040 ntBASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 AC084018.2-201ENST00000613093 2607 ntBASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 AL160286.2-201ENST00000567150 934 ntBASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD2Q8NHY2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD2Q8NHY2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFWD2Q8NHY2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFWD2Q8NHY2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 AC112777.1-201ENST00000540175 1423 ntBASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 MYC-208ENST00000641036 567 ntBASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 AL357033.4-201ENST00000617703 1807 ntBASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 TNRC18P3-201ENST00000441896 2691 ntBASIC18.26■□□□□ 0.51
RFWD2Q8NHY2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 KRT8P45-201ENST00000414328 1447 ntBASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 OR6D1P-202ENST00000641007 5290 ntBASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 ID1-201ENST00000376105 1233 ntBASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 HLA-A-209ENST00000638375 975 ntBASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFWD2Q8NHY2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms