Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTL9Q8NET4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.72■■□□□ 1.23
RTL9Q8NET4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
RTL9Q8NET4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RTL9Q8NET4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RTL9Q8NET4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RTL9Q8NET4 AC124864.1-201ENST00000623408 392 ntBASIC22.72■■□□□ 1.23
RTL9Q8NET4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.72■■□□□ 1.23
RTL9Q8NET4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTL9Q8NET4 LINC00167-201ENST00000530583 1419 ntBASIC22.72■■□□□ 1.23
RTL9Q8NET4 AC112777.1-201ENST00000540175 1423 ntBASIC22.72■■□□□ 1.23
RTL9Q8NET4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTL9Q8NET4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RTL9Q8NET4 MYLKP1-201ENST00000509077 1580 ntBASIC22.71■■□□□ 1.23
RTL9Q8NET4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RTL9Q8NET4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.71■■□□□ 1.23
RTL9Q8NET4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RTL9Q8NET4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RTL9Q8NET4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTL9Q8NET4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
RTL9Q8NET4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTL9Q8NET4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTL9Q8NET4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTL9Q8NET4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
RTL9Q8NET4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.71■■□□□ 1.23
RTL9Q8NET4 AC091607.1-201ENST00000490318 1060 ntBASIC22.71■■□□□ 1.23
RTL9Q8NET4 AC091304.2-201ENST00000564639 760 ntBASIC22.71■■□□□ 1.23
RTL9Q8NET4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTL9Q8NET4 SLC25A6P4-201ENST00000586535 553 ntBASIC22.71■■□□□ 1.23
RTL9Q8NET4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RTL9Q8NET4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.71■■□□□ 1.23
RTL9Q8NET4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
RTL9Q8NET4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTL9Q8NET4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTL9Q8NET4 AL024508.2-201ENST00000607749 1894 ntBASIC22.71■■□□□ 1.23
RTL9Q8NET4 SDHAP2-201ENST00000455183 2001 ntBASIC22.71■■□□□ 1.23
RTL9Q8NET4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
RTL9Q8NET4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RTL9Q8NET4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.7■■□□□ 1.23
RTL9Q8NET4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RTL9Q8NET4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.7■■□□□ 1.22
RTL9Q8NET4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.7■■□□□ 1.22
RTL9Q8NET4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RTL9Q8NET4 AL022342.1-201ENST00000400363 863 ntBASIC22.7■■□□□ 1.22
RTL9Q8NET4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RTL9Q8NET4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RTL9Q8NET4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RTL9Q8NET4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.7■■□□□ 1.22
RTL9Q8NET4 AC023511.2-201ENST00000618803 211 ntBASIC22.7■■□□□ 1.22
RTL9Q8NET4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.7■■□□□ 1.22
RTL9Q8NET4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC22.7■■□□□ 1.22
RTL9Q8NET4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.7■■□□□ 1.22
RTL9Q8NET4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RTL9Q8NET4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTL9Q8NET4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.69■■□□□ 1.22
RTL9Q8NET4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTL9Q8NET4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTL9Q8NET4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTL9Q8NET4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RTL9Q8NET4 AC106795.1-205ENST00000512851 1056 ntBASIC22.69■■□□□ 1.22
RTL9Q8NET4 AP002469.2-201ENST00000531724 424 ntBASIC22.69■■□□□ 1.22
RTL9Q8NET4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.69■■□□□ 1.22
RTL9Q8NET4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC22.69■■□□□ 1.22
RTL9Q8NET4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
RTL9Q8NET4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTL9Q8NET4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC22.69■■□□□ 1.22
RTL9Q8NET4 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.69■■□□□ 1.22
RTL9Q8NET4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RTL9Q8NET4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC22.69■■□□□ 1.22
RTL9Q8NET4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTL9Q8NET4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RTL9Q8NET4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 NSUN5P1-202ENST00000421140 1535 ntBASIC22.68■■□□□ 1.22
RTL9Q8NET4 NSUN5P2-203ENST00000457352 1529 ntBASIC22.68■■□□□ 1.22
RTL9Q8NET4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 VENTXP7-201ENST00000475503 772 ntBASIC22.68■■□□□ 1.22
RTL9Q8NET4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTL9Q8NET4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC22.68■■□□□ 1.22
RTL9Q8NET4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.68■■□□□ 1.22
RTL9Q8NET4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTL9Q8NET4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RTL9Q8NET4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
RTL9Q8NET4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTL9Q8NET4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
RTL9Q8NET4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms