Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 FITM1-202ENST00000559294 800 ntBASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 AL353719.1-201ENST00000566847 864 ntBASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 AL391005.1-201ENST00000623953 2435 ntBASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LSMEM1Q8N8F7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 TSPY7P-201ENST00000431358 1114 ntBASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 MIR4674-201ENST00000582457 87 ntBASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSMEM1Q8N8F7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 KRT17P2-201ENST00000300992 1314 ntBASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.91■□□□□ 0.3
LSMEM1Q8N8F7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms