Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 AC008622.2-201ENST00000617006 1229 ntBASIC18.97■□□□□ 0.63
PAF1Q8N7H5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 TERF1P1-201ENST00000311003 1181 ntBASIC18.96■□□□□ 0.63
PAF1Q8N7H5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 AL023284.2-201ENST00000405850 579 ntBASIC18.96■□□□□ 0.63
PAF1Q8N7H5 TMPOP1-202ENST00000424642 1267 ntBASIC18.96■□□□□ 0.63
PAF1Q8N7H5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 AC010203.1-204ENST00000548782 407 ntBASIC18.96■□□□□ 0.63
PAF1Q8N7H5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 AC036111.1-201ENST00000533973 1582 ntBASIC18.96■□□□□ 0.63
PAF1Q8N7H5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PAF1Q8N7H5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 KRT8P45-201ENST00000414328 1447 ntBASIC18.95■□□□□ 0.62
PAF1Q8N7H5 AC087289.5-201ENST00000586076 3175 ntBASIC18.95■□□□□ 0.62
PAF1Q8N7H5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 AC140113.3-201ENST00000605663 199 ntBASIC18.95■□□□□ 0.62
PAF1Q8N7H5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.95■□□□□ 0.62
PAF1Q8N7H5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAF1Q8N7H5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAF1Q8N7H5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.94■□□□□ 0.62
PAF1Q8N7H5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAF1Q8N7H5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAF1Q8N7H5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PAF1Q8N7H5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PAF1Q8N7H5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms