Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.32■□□□□ 0.84
NME8Q8N427 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NME8Q8N427 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NME8Q8N427 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NME8Q8N427 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NME8Q8N427 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.32■□□□□ 0.84
NME8Q8N427 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NME8Q8N427 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NME8Q8N427 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.31■□□□□ 0.84
NME8Q8N427 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.31■□□□□ 0.84
NME8Q8N427 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NME8Q8N427 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.31■□□□□ 0.84
NME8Q8N427 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NME8Q8N427 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 AC012615.1-201ENST00000565797 1299 ntBASIC20.31■□□□□ 0.84
NME8Q8N427 AC111152.3-201ENST00000569699 673 ntBASIC20.31■□□□□ 0.84
NME8Q8N427 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.31■□□□□ 0.84
NME8Q8N427 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.31■□□□□ 0.84
NME8Q8N427 AC083906.6-201ENST00000641366 219 ntBASIC20.31■□□□□ 0.84
NME8Q8N427 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
NME8Q8N427 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.31■□□□□ 0.84
NME8Q8N427 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NME8Q8N427 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.31■□□□□ 0.84
NME8Q8N427 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 AL163051.1-201ENST00000569214 1512 ntBASIC20.31■□□□□ 0.84
NME8Q8N427 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NME8Q8N427 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NME8Q8N427 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NME8Q8N427 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NME8Q8N427 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NME8Q8N427 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NME8Q8N427 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.3■□□□□ 0.84
NME8Q8N427 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.3■□□□□ 0.84
NME8Q8N427 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.3■□□□□ 0.84
NME8Q8N427 LINC00265-3P-201ENST00000447588 903 ntBASIC20.3■□□□□ 0.84
NME8Q8N427 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.3■□□□□ 0.84
NME8Q8N427 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
NME8Q8N427 GUSBP12-201ENST00000513727 720 ntBASIC20.3■□□□□ 0.84
NME8Q8N427 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NME8Q8N427 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
NME8Q8N427 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NME8Q8N427 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NME8Q8N427 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME8Q8N427 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME8Q8N427 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.29■□□□□ 0.84
NME8Q8N427 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
NME8Q8N427 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME8Q8N427 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
NME8Q8N427 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME8Q8N427 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.29■□□□□ 0.84
NME8Q8N427 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.29■□□□□ 0.84
NME8Q8N427 AP000867.3-201ENST00000524675 377 ntBASIC20.29■□□□□ 0.84
NME8Q8N427 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.29■□□□□ 0.84
NME8Q8N427 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.29■□□□□ 0.84
NME8Q8N427 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NME8Q8N427 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.29■□□□□ 0.84
NME8Q8N427 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.29■□□□□ 0.84
NME8Q8N427 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME8Q8N427 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.29■□□□□ 0.84
NME8Q8N427 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME8Q8N427 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME8Q8N427 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME8Q8N427 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NME8Q8N427 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME8Q8N427 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME8Q8N427 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.28■□□□□ 0.84
NME8Q8N427 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NME8Q8N427 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME8Q8N427 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms