Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 CYP2D8P-201ENST00000433633 1490 ntBASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 AC116562.4-202ENST00000641738 218 ntBASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 BICD1-207ENST00000551848 1962 ntBASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 MYLKP1-201ENST00000509077 1580 ntBASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE9Q8IYJ1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 INGX-201ENST00000359239 846 ntBASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 KRT18P41-201ENST00000518924 1277 ntBASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE9Q8IYJ1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 AC034236.2-201ENST00000606662 1610 ntBASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 AC007663.1-201ENST00000438948 1240 ntBASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 BX088651.1-201ENST00000540551 451 ntBASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE9Q8IYJ1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPNE9Q8IYJ1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPNE9Q8IYJ1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 AP000997.3-201ENST00000623333 2250 ntBASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 MMP23A-201ENST00000234610 1017 ntBASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 TSPY14P-201ENST00000303979 915 ntBASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 CR769767.2-201ENST00000622735 460 ntBASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 AC010947.1-201ENST00000623454 693 ntBASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 AL390961.4-201ENST00000623958 2535 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms