Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.88■■□□□ 1.25
SMC5Q8IY18 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 KRT17P2-201ENST00000300992 1314 ntBASIC22.87■■□□□ 1.25
SMC5Q8IY18 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
SMC5Q8IY18 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
SMC5Q8IY18 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
SMC5Q8IY18 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
SMC5Q8IY18 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.87■■□□□ 1.25
SMC5Q8IY18 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.87■■□□□ 1.25
SMC5Q8IY18 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.87■■□□□ 1.25
SMC5Q8IY18 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.87■■□□□ 1.25
SMC5Q8IY18 KRT8P9-201ENST00000558927 1449 ntBASIC22.87■■□□□ 1.25
SMC5Q8IY18 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.87■■□□□ 1.25
SMC5Q8IY18 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.87■■□□□ 1.25
SMC5Q8IY18 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SMC5Q8IY18 FLJ13224-201ENST00000313737 1514 ntBASIC22.87■■□□□ 1.25
SMC5Q8IY18 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 AR-207ENST00000612010 3896 ntTSL 5 BASIC22.86■■□□□ 1.25
SMC5Q8IY18 CYP2D8P-201ENST00000433633 1490 ntBASIC22.86■■□□□ 1.25
SMC5Q8IY18 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.86■■□□□ 1.25
SMC5Q8IY18 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.86■■□□□ 1.25
SMC5Q8IY18 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.86■■□□□ 1.25
SMC5Q8IY18 AC104390.1-201ENST00000555663 520 ntBASIC22.86■■□□□ 1.25
SMC5Q8IY18 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.86■■□□□ 1.25
SMC5Q8IY18 MIR4497-201ENST00000583208 89 ntBASIC22.86■■□□□ 1.25
SMC5Q8IY18 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.86■■□□□ 1.25
SMC5Q8IY18 AP006294.2-201ENST00000641667 209 ntBASIC22.86■■□□□ 1.25
SMC5Q8IY18 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.86■■□□□ 1.25
SMC5Q8IY18 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.86■■□□□ 1.25
SMC5Q8IY18 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
SMC5Q8IY18 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.86■■□□□ 1.25
SMC5Q8IY18 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SMC5Q8IY18 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SMC5Q8IY18 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 EGLN1P1-201ENST00000531623 762 ntBASIC22.85■■□□□ 1.25
SMC5Q8IY18 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.85■■□□□ 1.25
SMC5Q8IY18 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.85■■□□□ 1.25
SMC5Q8IY18 C2orf69P3-201ENST00000565542 1120 ntBASIC22.85■■□□□ 1.25
SMC5Q8IY18 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.85■■□□□ 1.25
SMC5Q8IY18 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.85■■□□□ 1.25
SMC5Q8IY18 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SMC5Q8IY18 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC22.84■■□□□ 1.25
SMC5Q8IY18 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMC5Q8IY18 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.84■■□□□ 1.25
SMC5Q8IY18 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.84■■□□□ 1.25
SMC5Q8IY18 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMC5Q8IY18 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMC5Q8IY18 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
SMC5Q8IY18 LINC01126-201ENST00000623515 1646 ntBASIC22.84■■□□□ 1.25
SMC5Q8IY18 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMC5Q8IY18 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SMC5Q8IY18 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMC5Q8IY18 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMC5Q8IY18 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMC5Q8IY18 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.84■■□□□ 1.25
SMC5Q8IY18 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.84■■□□□ 1.25
SMC5Q8IY18 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SMC5Q8IY18 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC22.84■■□□□ 1.25
SMC5Q8IY18 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SMC5Q8IY18 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.84■■□□□ 1.25
SMC5Q8IY18 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.84■■□□□ 1.25
SMC5Q8IY18 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.84■■□□□ 1.25
SMC5Q8IY18 AC010947.1-201ENST00000623454 693 ntBASIC22.84■■□□□ 1.25
SMC5Q8IY18 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
SMC5Q8IY18 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms