Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF111Q6ZNA4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 AC004980.1-204ENST00000429707 299 ntBASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 SNORA78-201ENST00000459373 127 ntBASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 AC026271.3-201ENST00000571884 352 ntBASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 GNAS-203ENST00000306120 1878 ntBASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF111Q6ZNA4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF111Q6ZNA4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.96■□□□□ 0.46
RNF111Q6ZNA4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.96■□□□□ 0.46
RNF111Q6ZNA4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
RNF111Q6ZNA4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 AL355355.2-201ENST00000442321 338 ntBASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 AC135776.1-201ENST00000319817 2481 ntBASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF111Q6ZNA4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF111Q6ZNA4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF111Q6ZNA4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF111Q6ZNA4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms