Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 NOC2LP1-202ENST00000452600 2235 ntBASIC19.38■□□□□ 0.69
RNF43Q68DV7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 BICD1-207ENST00000551848 1962 ntBASIC19.38■□□□□ 0.69
RNF43Q68DV7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF43Q68DV7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 AC011558.1-201ENST00000623459 338 ntBASIC19.38■□□□□ 0.69
RNF43Q68DV7 AL121956.5-201ENST00000625261 221 ntBASIC19.38■□□□□ 0.69
RNF43Q68DV7 AL031432.5-201ENST00000641059 760 ntBASIC19.38■□□□□ 0.69
RNF43Q68DV7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF43Q68DV7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF43Q68DV7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF43Q68DV7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF43Q68DV7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF43Q68DV7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF43Q68DV7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF43Q68DV7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF43Q68DV7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF43Q68DV7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF43Q68DV7 AL354751.1-201ENST00000412768 1863 ntBASIC19.37■□□□□ 0.69
RNF43Q68DV7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF43Q68DV7 IRX1P1-201ENST00000438849 1838 ntBASIC19.37■□□□□ 0.69
RNF43Q68DV7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF43Q68DV7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
RNF43Q68DV7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF43Q68DV7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF43Q68DV7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF43Q68DV7 HCG4P8-203ENST00000443049 980 ntBASIC19.36■□□□□ 0.69
RNF43Q68DV7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF43Q68DV7 AL441883.1-201ENST00000566170 1045 ntBASIC19.36■□□□□ 0.69
RNF43Q68DV7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.36■□□□□ 0.69
RNF43Q68DV7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF43Q68DV7 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.36■□□□□ 0.69
RNF43Q68DV7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RNF43Q68DV7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF43Q68DV7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF43Q68DV7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF43Q68DV7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF43Q68DV7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF43Q68DV7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF43Q68DV7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF43Q68DV7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF43Q68DV7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF43Q68DV7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF43Q68DV7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 FAM86EP-206ENST00000510506 987 ntBASIC19.35■□□□□ 0.69
RNF43Q68DV7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF43Q68DV7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RNF43Q68DV7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF43Q68DV7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.35■□□□□ 0.69
RNF43Q68DV7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms