Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.97■■□□□ 1.11
CREB3L3Q68CJ9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 MIR149-201ENST00000384879 89 ntBASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 NOC2LP1-202ENST00000452600 2235 ntBASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 AC009102.3-201ENST00000623118 1491 ntBASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CREB3L3Q68CJ9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.11
CREB3L3Q68CJ9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
CREB3L3Q68CJ9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
CREB3L3Q68CJ9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.95■■□□□ 1.11
CREB3L3Q68CJ9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 SEC1P-202ENST00000473944 940 ntBASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CREB3L3Q68CJ9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 ECEL1P3-201ENST00000427961 737 ntBASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 AC024243.1-201ENST00000609234 778 ntBASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CREB3L3Q68CJ9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms