Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
SNAPC4Q5SXM2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 MCCD1P2-201ENST00000423228 335 ntBASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 PON3-203ENST00000427422 894 ntTSL 3 BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SNAPC4Q5SXM2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC30.07■■■□□ 2.41
SNAPC4Q5SXM2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 LBX2-AS1-202ENST00000603175 2083 ntBASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 KRT18P27-201ENST00000427733 1299 ntBASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 IRX1P1-201ENST00000438849 1838 ntBASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
SNAPC4Q5SXM2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 HTR5BP-201ENST00000430851 1154 ntBASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 KRT18P41-201ENST00000518924 1277 ntBASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 FEM1AP3-201ENST00000403722 1741 ntBASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 UBQLN4P1-201ENST00000461599 1801 ntBASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 NKAPP1-205ENST00000585790 367 ntBASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
SNAPC4Q5SXM2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC30.05■■■□□ 2.4
SNAPC4Q5SXM2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 AC254562.1-201ENST00000417586 456 ntBASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
SNAPC4Q5SXM2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms