Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 AP005117.1-201ENST00000584346 1413 ntBASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 MIR3180-4-201ENST00000582223 153 ntBASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 AP002414.3-201ENST00000589352 1468 ntBASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 AC025062.2-201ENST00000605477 670 ntBASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 KRT89P-201ENST00000620027 1478 ntBASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RSPO4Q2I0M5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 AL109659.2-201ENST00000606809 1674 ntBASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 AC009947.1-201ENST00000444350 727 ntBASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 ALG1L5P-201ENST00000482043 771 ntBASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 AC008556.1-201ENST00000610908 2040 ntBASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 AL356309.3-201ENST00000624132 1934 ntBASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RSPO4Q2I0M5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RSPO4Q2I0M5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
RSPO4Q2I0M5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RSPO4Q2I0M5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RSPO4Q2I0M5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RSPO4Q2I0M5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RSPO4Q2I0M5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
RSPO4Q2I0M5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RSPO4Q2I0M5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 AC138761.1-201ENST00000584393 385 ntBASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 AC064836.3-201ENST00000607928 673 ntBASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 AL035252.4-201ENST00000624174 288 ntBASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms