Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA1Q09470 AC092865.7-201ENST00000641832 219 ntBASIC20.31■□□□□ 0.84
KCNA1Q09470 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA1Q09470 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
KCNA1Q09470 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA1Q09470 AL163051.1-201ENST00000569214 1512 ntBASIC20.31■□□□□ 0.84
KCNA1Q09470 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNA1Q09470 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KCNA1Q09470 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNA1Q09470 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA1Q09470 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNA1Q09470 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNA1Q09470 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA1Q09470 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
KCNA1Q09470 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA1Q09470 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
KCNA1Q09470 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA1Q09470 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNA1Q09470 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNA1Q09470 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNA1Q09470 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNA1Q09470 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNA1Q09470 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KCNA1Q09470 AP000593.1-201ENST00000393668 712 ntBASIC20.3■□□□□ 0.84
KCNA1Q09470 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNA1Q09470 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNA1Q09470 COX11P1-201ENST00000489116 835 ntBASIC20.3■□□□□ 0.84
KCNA1Q09470 YBX1P2-201ENST00000489612 999 ntBASIC20.3■□□□□ 0.84
KCNA1Q09470 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.3■□□□□ 0.84
KCNA1Q09470 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.3■□□□□ 0.84
KCNA1Q09470 KRT18P21-201ENST00000515767 1272 ntBASIC20.3■□□□□ 0.84
KCNA1Q09470 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA1Q09470 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNA1Q09470 MYC-208ENST00000641036 567 ntBASIC20.3■□□□□ 0.84
KCNA1Q09470 SDHAP2-201ENST00000455183 2001 ntBASIC20.3■□□□□ 0.84
KCNA1Q09470 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNA1Q09470 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA1Q09470 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNA1Q09470 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA1Q09470 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KCNA1Q09470 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
KCNA1Q09470 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA1Q09470 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA1Q09470 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA1Q09470 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA1Q09470 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA1Q09470 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA1Q09470 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA1Q09470 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA1Q09470 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA1Q09470 BX664615.1-201ENST00000443558 458 ntBASIC20.29■□□□□ 0.84
KCNA1Q09470 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA1Q09470 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA1Q09470 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
KCNA1Q09470 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
KCNA1Q09470 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KCNA1Q09470 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
KCNA1Q09470 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA1Q09470 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNA1Q09470 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.28■□□□□ 0.84
KCNA1Q09470 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNA1Q09470 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 ESPNP-201ENST00000270691 2015 ntBASIC20.28■□□□□ 0.84
KCNA1Q09470 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.28■□□□□ 0.84
KCNA1Q09470 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNA1Q09470 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KCNA1Q09470 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.28■□□□□ 0.84
KCNA1Q09470 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
KCNA1Q09470 AC010240.3-201ENST00000607688 395 ntBASIC20.28■□□□□ 0.84
KCNA1Q09470 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA1Q09470 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms