Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
HMGCS1Q01581 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.83■□□□□ 0.45
HMGCS1Q01581 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS1Q01581 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS1Q01581 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HMGCS1Q01581 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCS1Q01581 ESPNP-201ENST00000270691 2015 ntBASIC17.83■□□□□ 0.45
HMGCS1Q01581 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS1Q01581 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS1Q01581 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS1Q01581 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.83■□□□□ 0.44
HMGCS1Q01581 MIR564-202ENST00000385049 94 ntBASIC17.83■□□□□ 0.44
HMGCS1Q01581 MIR718-201ENST00000390190 70 ntBASIC17.83■□□□□ 0.44
HMGCS1Q01581 AL355355.2-201ENST00000442321 338 ntBASIC17.83■□□□□ 0.44
HMGCS1Q01581 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.83■□□□□ 0.44
HMGCS1Q01581 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.83■□□□□ 0.44
HMGCS1Q01581 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.83■□□□□ 0.44
HMGCS1Q01581 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCS1Q01581 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCS1Q01581 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCS1Q01581 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HMGCS1Q01581 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HMGCS1Q01581 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.82■□□□□ 0.44
HMGCS1Q01581 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCS1Q01581 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCS1Q01581 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.82■□□□□ 0.44
HMGCS1Q01581 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCS1Q01581 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 AC093827.2-201ENST00000512654 315 ntBASIC17.82■□□□□ 0.44
HMGCS1Q01581 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 AC026471.5-201ENST00000615068 467 ntBASIC17.82■□□□□ 0.44
HMGCS1Q01581 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMGCS1Q01581 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.82■□□□□ 0.44
HMGCS1Q01581 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.82■□□□□ 0.44
HMGCS1Q01581 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCS1Q01581 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HMGCS1Q01581 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCS1Q01581 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCS1Q01581 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
HMGCS1Q01581 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGCS1Q01581 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCS1Q01581 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HMGCS1Q01581 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 KRT18P41-201ENST00000518924 1277 ntBASIC17.81■□□□□ 0.44
HMGCS1Q01581 MIR4674-201ENST00000582457 87 ntBASIC17.81■□□□□ 0.44
HMGCS1Q01581 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
HMGCS1Q01581 AC093677.2-201ENST00000600169 1863 ntBASIC17.81■□□□□ 0.44
HMGCS1Q01581 LETM1P2-201ENST00000597330 2178 ntBASIC17.81■□□□□ 0.44
HMGCS1Q01581 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCS1Q01581 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGCS1Q01581 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCS1Q01581 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCS1Q01581 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCS1Q01581 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCS1Q01581 PCDHB18P-201ENST00000524813 2368 ntBASIC17.8■□□□□ 0.44
HMGCS1Q01581 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 AC067852.2-201ENST00000590513 2313 ntBASIC17.8■□□□□ 0.44
HMGCS1Q01581 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCS1Q01581 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCS1Q01581 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HMGCS1Q01581 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms