Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RBM3P98179 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC11.67□□□□□ -0.54
RBM3P98179 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
RBM3P98179 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC11.67□□□□□ -0.54
RBM3P98179 SLC7A5P2-201ENST00000553010 536 ntBASIC11.67□□□□□ -0.54
RBM3P98179 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC11.67□□□□□ -0.54
RBM3P98179 AL355001.2-201ENST00000620617 1191 ntBASIC11.67□□□□□ -0.54
RBM3P98179 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC11.67□□□□□ -0.54
RBM3P98179 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RBM3P98179 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
RBM3P98179 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC11.67□□□□□ -0.54
RBM3P98179 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
RBM3P98179 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
RBM3P98179 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RBM3P98179 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RBM3P98179 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
RBM3P98179 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RBM3P98179 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
RBM3P98179 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RBM3P98179 AC108860.2-201ENST00000562760 2183 ntBASIC11.67□□□□□ -0.54
RBM3P98179 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
RBM3P98179 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RBM3P98179 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
RBM3P98179 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RBM3P98179 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC11.66□□□□□ -0.54
RBM3P98179 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC11.66□□□□□ -0.54
RBM3P98179 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RBM3P98179 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
RBM3P98179 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC11.66□□□□□ -0.54
RBM3P98179 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC11.66□□□□□ -0.54
RBM3P98179 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC11.66□□□□□ -0.54
RBM3P98179 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
RBM3P98179 CREM-229ENST00000474362 1030 ntTSL 2 BASIC11.66□□□□□ -0.54
RBM3P98179 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
RBM3P98179 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
RBM3P98179 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
RBM3P98179 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
RBM3P98179 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RBM3P98179 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
RBM3P98179 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RBM3P98179 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC11.65□□□□□ -0.54
RBM3P98179 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC11.65□□□□□ -0.54
RBM3P98179 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
RBM3P98179 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC11.65□□□□□ -0.54
RBM3P98179 MPST-204ENST00000404393 1329 ntTSL 5 BASIC11.65□□□□□ -0.54
RBM3P98179 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 AC018695.7-201ENST00000624587 2492 ntBASIC11.65□□□□□ -0.54
RBM3P98179 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
RBM3P98179 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.65□□□□□ -0.54
RBM3P98179 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 NKILA-202ENST00000614771 2598 ntBASIC11.65□□□□□ -0.54
RBM3P98179 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
RBM3P98179 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC11.65□□□□□ -0.54
RBM3P98179 FGF8-207ENST00000618991 856 ntTSL 3 BASIC11.65□□□□□ -0.54
RBM3P98179 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC11.65□□□□□ -0.54
RBM3P98179 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 RBM17P2-201ENST00000616397 1405 ntBASIC11.65□□□□□ -0.54
RBM3P98179 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RBM3P98179 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms