Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
CKS1BP61024 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
CKS1BP61024 AC067852.2-201ENST00000590513 2313 ntBASIC12.94□□□□□ -0.34
CKS1BP61024 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
CKS1BP61024 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.94□□□□□ -0.34
CKS1BP61024 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 AL390719.1-204ENST00000412397 1219 ntBASIC12.94□□□□□ -0.34
CKS1BP61024 AL355472.2-201ENST00000422958 438 ntBASIC12.94□□□□□ -0.34
CKS1BP61024 CYP2T1P-201ENST00000432607 1285 ntBASIC12.94□□□□□ -0.34
CKS1BP61024 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.94□□□□□ -0.34
CKS1BP61024 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC12.94□□□□□ -0.34
CKS1BP61024 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
CKS1BP61024 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CKS1BP61024 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CKS1BP61024 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC12.94□□□□□ -0.34
CKS1BP61024 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CKS1BP61024 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CKS1BP61024 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CKS1BP61024 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.93□□□□□ -0.34
CKS1BP61024 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CKS1BP61024 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 AL161938.1-201ENST00000569833 2180 ntBASIC12.93□□□□□ -0.34
CKS1BP61024 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC12.93□□□□□ -0.34
CKS1BP61024 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CKS1BP61024 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.93□□□□□ -0.34
CKS1BP61024 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
CKS1BP61024 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC12.93□□□□□ -0.34
CKS1BP61024 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CKS1BP61024 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.93□□□□□ -0.34
CKS1BP61024 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.93□□□□□ -0.34
CKS1BP61024 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.93□□□□□ -0.34
CKS1BP61024 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC12.93□□□□□ -0.34
CKS1BP61024 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC12.93□□□□□ -0.34
CKS1BP61024 OR10C1-204ENST00000622521 1039 ntBASIC12.93□□□□□ -0.34
CKS1BP61024 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.93□□□□□ -0.34
CKS1BP61024 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CKS1BP61024 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.93□□□□□ -0.34
CKS1BP61024 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CKS1BP61024 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.93□□□□□ -0.34
CKS1BP61024 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms