Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC008406.3-201ENST00000620001 1374 ntBASIC15.88■□□□□ 0.13
AP3S2P59780 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
AP3S2P59780 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3S2P59780 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
AP3S2P59780 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3S2P59780 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
AP3S2P59780 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3S2P59780 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 AL023806.1-201ENST00000603994 1649 ntBASIC15.88■□□□□ 0.13
AP3S2P59780 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.88■□□□□ 0.13
AP3S2P59780 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3S2P59780 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.88■□□□□ 0.13
AP3S2P59780 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.88■□□□□ 0.13
AP3S2P59780 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3S2P59780 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3S2P59780 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
AP3S2P59780 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 MTMR9LP-203ENST00000426597 1545 ntBASIC15.88■□□□□ 0.13
AP3S2P59780 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
AP3S2P59780 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.88■□□□□ 0.13
AP3S2P59780 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3S2P59780 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3S2P59780 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
AP3S2P59780 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3S2P59780 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP3S2P59780 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3S2P59780 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.87■□□□□ 0.13
AP3S2P59780 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.87■□□□□ 0.13
AP3S2P59780 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.87■□□□□ 0.13
AP3S2P59780 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3S2P59780 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3S2P59780 KRT18P11-201ENST00000435214 1283 ntBASIC15.87■□□□□ 0.13
AP3S2P59780 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.87■□□□□ 0.13
AP3S2P59780 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.87■□□□□ 0.13
AP3S2P59780 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.87■□□□□ 0.13
AP3S2P59780 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP3S2P59780 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.87■□□□□ 0.13
AP3S2P59780 AC110285.6-201ENST00000617652 491 ntBASIC15.87■□□□□ 0.13
AP3S2P59780 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.87■□□□□ 0.13
AP3S2P59780 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
AP3S2P59780 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.87■□□□□ 0.13
AP3S2P59780 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
AP3S2P59780 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP3S2P59780 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
AP3S2P59780 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.87■□□□□ 0.13
AP3S2P59780 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP3S2P59780 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
AP3S2P59780 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP3S2P59780 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 AC068338.2-201ENST00000563278 1430 ntBASIC15.86■□□□□ 0.13
AP3S2P59780 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.86■□□□□ 0.13
AP3S2P59780 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.86■□□□□ 0.13
AP3S2P59780 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.86■□□□□ 0.13
AP3S2P59780 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.86■□□□□ 0.13
AP3S2P59780 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
AP3S2P59780 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 RCC2P6-201ENST00000526625 1557 ntBASIC15.86■□□□□ 0.13
AP3S2P59780 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
AP3S2P59780 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
AP3S2P59780 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
AP3S2P59780 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
AP3S2P59780 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP3S2P59780 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.86■□□□□ 0.13
AP3S2P59780 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms