Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXG1P55316 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXG1P55316 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
FOXG1P55316 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 HLA-F-220ENST00000434407 884 ntBASIC16.18■□□□□ 0.18
FOXG1P55316 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXG1P55316 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
FOXG1P55316 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
FOXG1P55316 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXG1P55316 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
FOXG1P55316 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
FOXG1P55316 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXG1P55316 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXG1P55316 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 AC005332.1-201ENST00000577698 1310 ntBASIC16.18■□□□□ 0.18
FOXG1P55316 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXG1P55316 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXG1P55316 AC104581.1-202ENST00000635932 2618 ntBASIC16.17■□□□□ 0.18
FOXG1P55316 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
FOXG1P55316 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
FOXG1P55316 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXG1P55316 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXG1P55316 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.17■□□□□ 0.18
FOXG1P55316 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXG1P55316 MIR3180-4-201ENST00000582223 153 ntBASIC16.17■□□□□ 0.18
FOXG1P55316 AL121956.5-201ENST00000625261 221 ntBASIC16.17■□□□□ 0.18
FOXG1P55316 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXG1P55316 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXG1P55316 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXG1P55316 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXG1P55316 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXG1P55316 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
FOXG1P55316 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
FOXG1P55316 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
FOXG1P55316 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXG1P55316 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXG1P55316 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.16■□□□□ 0.18
FOXG1P55316 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
FOXG1P55316 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXG1P55316 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
FOXG1P55316 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXG1P55316 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 PVRIG2P-201ENST00000435460 978 ntBASIC16.16■□□□□ 0.18
FOXG1P55316 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXG1P55316 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXG1P55316 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXG1P55316 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXG1P55316 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.16■□□□□ 0.18
FOXG1P55316 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXG1P55316 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXG1P55316 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXG1P55316 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXG1P55316 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXG1P55316 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXG1P55316 AC009102.3-201ENST00000623118 1491 ntBASIC16.16■□□□□ 0.18
FOXG1P55316 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXG1P55316 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXG1P55316 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXG1P55316 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms