Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH4P55283 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH4P55283 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH4P55283 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CDH4P55283 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH4P55283 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CDH4P55283 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH4P55283 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH4P55283 AC091076.1-201ENST00000610741 619 ntBASIC18.86■□□□□ 0.61
CDH4P55283 AL358472.4-201ENST00000633140 710 ntBASIC18.86■□□□□ 0.61
CDH4P55283 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH4P55283 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH4P55283 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH4P55283 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH4P55283 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH4P55283 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDH4P55283 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH4P55283 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDH4P55283 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH4P55283 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH4P55283 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH4P55283 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDH4P55283 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH4P55283 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH4P55283 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDH4P55283 AL645929.1-201ENST00000420084 975 ntBASIC18.85■□□□□ 0.61
CDH4P55283 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH4P55283 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.85■□□□□ 0.61
CDH4P55283 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CDH4P55283 AP000550.4-202ENST00000639755 178 ntBASIC18.85■□□□□ 0.61
CDH4P55283 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDH4P55283 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH4P55283 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH4P55283 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH4P55283 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH4P55283 AC126763.1-201ENST00000552015 2118 ntBASIC18.85■□□□□ 0.61
CDH4P55283 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CDH4P55283 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.84■□□□□ 0.61
CDH4P55283 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH4P55283 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH4P55283 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH4P55283 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH4P55283 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.84■□□□□ 0.61
CDH4P55283 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CDH4P55283 AC024563.2-201ENST00000603282 481 ntBASIC18.84■□□□□ 0.61
CDH4P55283 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH4P55283 AC116407.4-201ENST00000623319 1061 ntBASIC18.84■□□□□ 0.61
CDH4P55283 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH4P55283 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CDH4P55283 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDH4P55283 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH4P55283 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH4P55283 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH4P55283 AC073592.3-201ENST00000625118 1834 ntBASIC18.84■□□□□ 0.61
CDH4P55283 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDH4P55283 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
CDH4P55283 IER3-202ENST00000376377 1350 ntBASIC18.83■□□□□ 0.61
CDH4P55283 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CDH4P55283 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.83■□□□□ 0.61
CDH4P55283 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CDH4P55283 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH4P55283 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH4P55283 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.83■□□□□ 0.6
CDH4P55283 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH4P55283 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.83■□□□□ 0.6
CDH4P55283 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH4P55283 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH4P55283 AL162741.1-201ENST00000565563 1558 ntBASIC18.83■□□□□ 0.6
CDH4P55283 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH4P55283 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH4P55283 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH4P55283 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH4P55283 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH4P55283 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.83■□□□□ 0.6
CDH4P55283 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH4P55283 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH4P55283 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms