Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
PSMD4P55036 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PSMD4P55036 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.21■□□□□ 0.35
PSMD4P55036 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.21■□□□□ 0.35
PSMD4P55036 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PSMD4P55036 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.21■□□□□ 0.35
PSMD4P55036 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.21■□□□□ 0.35
PSMD4P55036 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PSMD4P55036 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.21■□□□□ 0.35
PSMD4P55036 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PSMD4P55036 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.21■□□□□ 0.35
PSMD4P55036 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 AC073592.3-201ENST00000625118 1834 ntBASIC17.21■□□□□ 0.35
PSMD4P55036 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PSMD4P55036 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
PSMD4P55036 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PSMD4P55036 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PSMD4P55036 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PSMD4P55036 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 KRT18P41-201ENST00000518924 1277 ntBASIC17.2■□□□□ 0.34
PSMD4P55036 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.2■□□□□ 0.34
PSMD4P55036 MIR4674-201ENST00000582457 87 ntBASIC17.2■□□□□ 0.34
PSMD4P55036 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PSMD4P55036 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.2■□□□□ 0.34
PSMD4P55036 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.2■□□□□ 0.34
PSMD4P55036 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PSMD4P55036 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.2■□□□□ 0.34
PSMD4P55036 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PSMD4P55036 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PSMD4P55036 AC036111.1-201ENST00000533973 1582 ntBASIC17.19■□□□□ 0.34
PSMD4P55036 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.19■□□□□ 0.34
PSMD4P55036 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PSMD4P55036 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
PSMD4P55036 AP000523.1-201ENST00000398242 1049 ntBASIC17.19■□□□□ 0.34
PSMD4P55036 ECEL1P2-202ENST00000465689 757 ntBASIC17.19■□□□□ 0.34
PSMD4P55036 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.19■□□□□ 0.34
PSMD4P55036 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
PSMD4P55036 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.19■□□□□ 0.34
PSMD4P55036 CR769767.2-201ENST00000622735 460 ntBASIC17.19■□□□□ 0.34
PSMD4P55036 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 AC133561.5-201ENST00000635547 218 ntBASIC17.19■□□□□ 0.34
PSMD4P55036 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.19■□□□□ 0.34
PSMD4P55036 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PSMD4P55036 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.19■□□□□ 0.34
PSMD4P55036 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.19■□□□□ 0.34
PSMD4P55036 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PSMD4P55036 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.18■□□□□ 0.34
PSMD4P55036 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms