Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.74■□□□□ 0.91
EPHB4P54760 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.74■□□□□ 0.91
EPHB4P54760 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.74■□□□□ 0.91
EPHB4P54760 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
EPHB4P54760 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.74■□□□□ 0.91
EPHB4P54760 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
EPHB4P54760 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.74■□□□□ 0.91
EPHB4P54760 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.74■□□□□ 0.91
EPHB4P54760 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.74■□□□□ 0.91
EPHB4P54760 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
EPHB4P54760 RNF126P1-202ENST00000569893 925 ntBASIC20.74■□□□□ 0.91
EPHB4P54760 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
EPHB4P54760 AC120114.3-201ENST00000611923 658 ntBASIC20.74■□□□□ 0.91
EPHB4P54760 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
EPHB4P54760 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
EPHB4P54760 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB4P54760 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHB4P54760 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHB4P54760 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHB4P54760 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHB4P54760 AP001271.2-201ENST00000624018 1556 ntBASIC20.73■□□□□ 0.91
EPHB4P54760 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
EPHB4P54760 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.73■□□□□ 0.91
EPHB4P54760 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EPHB4P54760 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
EPHB4P54760 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.73■□□□□ 0.91
EPHB4P54760 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
EPHB4P54760 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EPHB4P54760 TSPY12P-201ENST00000421279 868 ntBASIC20.73■□□□□ 0.91
EPHB4P54760 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.73■□□□□ 0.91
EPHB4P54760 HLA-F-220ENST00000434407 884 ntBASIC20.73■□□□□ 0.91
EPHB4P54760 KRT16P4-201ENST00000453883 522 ntBASIC20.73■□□□□ 0.91
EPHB4P54760 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.73■□□□□ 0.91
EPHB4P54760 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.73■□□□□ 0.91
EPHB4P54760 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.73■□□□□ 0.91
EPHB4P54760 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.73■□□□□ 0.91
EPHB4P54760 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EPHB4P54760 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.73■□□□□ 0.91
EPHB4P54760 AC005082.1-201ENST00000413042 2259 ntBASIC20.73■□□□□ 0.91
EPHB4P54760 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
EPHB4P54760 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHB4P54760 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHB4P54760 AL138781.2-201ENST00000617896 1843 ntBASIC20.72■□□□□ 0.91
EPHB4P54760 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHB4P54760 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHB4P54760 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.72■□□□□ 0.91
EPHB4P54760 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
EPHB4P54760 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.72■□□□□ 0.91
EPHB4P54760 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHB4P54760 TOB2P1-201ENST00000469761 992 ntBASIC20.72■□□□□ 0.91
EPHB4P54760 AL662844.1-201ENST00000546340 181 ntBASIC20.72■□□□□ 0.91
EPHB4P54760 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.72■□□□□ 0.91
EPHB4P54760 AL121912.1-201ENST00000603683 238 ntBASIC20.72■□□□□ 0.91
EPHB4P54760 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.72■□□□□ 0.91
EPHB4P54760 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHB4P54760 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.72■□□□□ 0.91
EPHB4P54760 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHB4P54760 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EPHB4P54760 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EPHB4P54760 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
EPHB4P54760 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
EPHB4P54760 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.71■□□□□ 0.91
EPHB4P54760 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
EPHB4P54760 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
EPHB4P54760 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHB4P54760 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.71■□□□□ 0.91
EPHB4P54760 GPAT2P1-201ENST00000444924 1672 ntBASIC20.71■□□□□ 0.91
EPHB4P54760 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
EPHB4P54760 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EPHB4P54760 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EPHB4P54760 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
EPHB4P54760 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.71■□□□□ 0.91
EPHB4P54760 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.71■□□□□ 0.91
EPHB4P54760 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.71■□□□□ 0.91
EPHB4P54760 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.71■□□□□ 0.91
EPHB4P54760 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.71■□□□□ 0.91
EPHB4P54760 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.71■□□□□ 0.91
EPHB4P54760 BX640515.1-201ENST00000617215 977 ntBASIC20.71■□□□□ 0.91
EPHB4P54760 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHB4P54760 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.71■□□□□ 0.91
EPHB4P54760 AC120498.9-201ENST00000339021 3867 ntBASIC20.71■□□□□ 0.91
EPHB4P54760 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
EPHB4P54760 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHB4P54760 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHB4P54760 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EPHB4P54760 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
EPHB4P54760 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.7■□□□□ 0.91
EPHB4P54760 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHB4P54760 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms