Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SLC25A1P53007 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC25A1P53007 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC25A1P53007 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC25A1P53007 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SLC25A1P53007 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC25A1P53007 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
SLC25A1P53007 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC25A1P53007 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC25A1P53007 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLC25A1P53007 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC25A1P53007 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SLC25A1P53007 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC25A1P53007 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLC25A1P53007 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC25A1P53007 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC25A1P53007 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC25A1P53007 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC25A1P53007 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SLC25A1P53007 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SLC25A1P53007 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SLC25A1P53007 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 KRT18P29-201ENST00000397031 1267 ntBASIC16.41■□□□□ 0.22
SLC25A1P53007 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC25A1P53007 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.41■□□□□ 0.22
SLC25A1P53007 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC25A1P53007 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC25A1P53007 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC25A1P53007 AP001412.1-201ENST00000608405 714 ntBASIC16.41■□□□□ 0.22
SLC25A1P53007 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC25A1P53007 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC25A1P53007 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC25A1P53007 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SLC25A1P53007 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC25A1P53007 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC25A1P53007 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC25A1P53007 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC25A1P53007 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC25A1P53007 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC25A1P53007 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC25A1P53007 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SLC25A1P53007 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SLC25A1P53007 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC25A1P53007 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC25A1P53007 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC25A1P53007 ABHD17AP1-201ENST00000358206 933 ntBASIC16.4■□□□□ 0.22
SLC25A1P53007 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC25A1P53007 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC25A1P53007 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC25A1P53007 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC25A1P53007 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC25A1P53007 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC25A1P53007 AL096828.2-201ENST00000567259 1965 ntBASIC16.4■□□□□ 0.22
SLC25A1P53007 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC25A1P53007 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC25A1P53007 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SLC25A1P53007 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms