Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 FEM1AP4-201ENST00000443167 1987 ntBASIC20.81■□□□□ 0.92
LBX1P52954 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LBX1P52954 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LBX1P52954 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
LBX1P52954 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
LBX1P52954 AP002414.1-201ENST00000391405 1147 ntBASIC20.81■□□□□ 0.92
LBX1P52954 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.81■□□□□ 0.92
LBX1P52954 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.81■□□□□ 0.92
LBX1P52954 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.81■□□□□ 0.92
LBX1P52954 VN2R19P-201ENST00000442399 1052 ntBASIC20.81■□□□□ 0.92
LBX1P52954 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LBX1P52954 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LBX1P52954 MIR4751-201ENST00000578027 74 ntBASIC20.81■□□□□ 0.92
LBX1P52954 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.81■□□□□ 0.92
LBX1P52954 LINC00628-201ENST00000628516 1289 ntBASIC20.81■□□□□ 0.92
LBX1P52954 AL513210.1-201ENST00000629608 234 ntBASIC20.81■□□□□ 0.92
LBX1P52954 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
LBX1P52954 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.81■□□□□ 0.92
LBX1P52954 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LBX1P52954 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LBX1P52954 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LBX1P52954 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LBX1P52954 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LBX1P52954 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LBX1P52954 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.8■□□□□ 0.92
LBX1P52954 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LBX1P52954 AC004461.1-201ENST00000412461 403 ntBASIC20.8■□□□□ 0.92
LBX1P52954 FAM58CP-201ENST00000435741 640 ntBASIC20.8■□□□□ 0.92
LBX1P52954 HCG4B-203ENST00000450128 991 ntBASIC20.8■□□□□ 0.92
LBX1P52954 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.8■□□□□ 0.92
LBX1P52954 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.8■□□□□ 0.92
LBX1P52954 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LBX1P52954 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.8■□□□□ 0.92
LBX1P52954 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
LBX1P52954 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LBX1P52954 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LBX1P52954 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.8■□□□□ 0.92
LBX1P52954 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LBX1P52954 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LBX1P52954 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LBX1P52954 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LBX1P52954 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.79■□□□□ 0.92
LBX1P52954 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.79■□□□□ 0.92
LBX1P52954 ELK2BP-201ENST00000415014 1224 ntBASIC20.79■□□□□ 0.92
LBX1P52954 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.79■□□□□ 0.92
LBX1P52954 ACTG1P14-201ENST00000446382 1122 ntBASIC20.79■□□□□ 0.92
LBX1P52954 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.79■□□□□ 0.92
LBX1P52954 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.79■□□□□ 0.92
LBX1P52954 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.79■□□□□ 0.92
LBX1P52954 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LBX1P52954 MIR6799-201ENST00000620297 69 ntBASIC20.79■□□□□ 0.92
LBX1P52954 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LBX1P52954 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LBX1P52954 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LBX1P52954 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LBX1P52954 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LBX1P52954 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LBX1P52954 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.79■□□□□ 0.92
LBX1P52954 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.78■□□□□ 0.92
LBX1P52954 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LBX1P52954 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LBX1P52954 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LBX1P52954 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.78■□□□□ 0.92
LBX1P52954 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LBX1P52954 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.78■□□□□ 0.92
LBX1P52954 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LBX1P52954 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LBX1P52954 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
LBX1P52954 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LBX1P52954 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LBX1P52954 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.78■□□□□ 0.92
LBX1P52954 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.78■□□□□ 0.92
LBX1P52954 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LBX1P52954 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.78■□□□□ 0.92
LBX1P52954 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.78■□□□□ 0.92
LBX1P52954 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.78■□□□□ 0.92
LBX1P52954 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.78■□□□□ 0.92
LBX1P52954 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LBX1P52954 AL022326.1-202ENST00000641533 845 ntBASIC20.78■□□□□ 0.92
LBX1P52954 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LBX1P52954 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LBX1P52954 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LBX1P52954 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LBX1P52954 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.77■□□□□ 0.92
LBX1P52954 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LBX1P52954 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LBX1P52954 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.77■□□□□ 0.92
LBX1P52954 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LBX1P52954 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms