Protein–RNA interactions for Protein: P50991

CCT4, T-complex protein 1 subunit delta, humanhuman

Known RBP Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P50991 AC009102.3-201ENST00000623118 1491 ntBASIC23.3■■□□□ 1.32
CCT4P50991 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCT4P50991 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.29■■□□□ 1.32
CCT4P50991 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
CCT4P50991 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.29■■□□□ 1.32
CCT4P50991 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
CCT4P50991 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CCT4P50991 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC23.29■■□□□ 1.32
CCT4P50991 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.29■■□□□ 1.32
CCT4P50991 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.29■■□□□ 1.32
CCT4P50991 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCT4P50991 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCT4P50991 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CCT4P50991 SDHAP2-201ENST00000455183 2001 ntBASIC23.28■■□□□ 1.32
CCT4P50991 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCT4P50991 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.28■■□□□ 1.32
CCT4P50991 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCT4P50991 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.28■■□□□ 1.32
CCT4P50991 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.28■■□□□ 1.32
CCT4P50991 LINC01311-201ENST00000565162 1445 ntBASIC23.28■■□□□ 1.32
CCT4P50991 AC005082.1-201ENST00000413042 2259 ntBASIC23.28■■□□□ 1.32
CCT4P50991 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCT4P50991 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCT4P50991 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.28■■□□□ 1.32
CCT4P50991 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
CCT4P50991 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.28■■□□□ 1.32
CCT4P50991 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.28■■□□□ 1.32
CCT4P50991 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.28■■□□□ 1.32
CCT4P50991 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CCT4P50991 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CCT4P50991 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.28■■□□□ 1.32
CCT4P50991 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCT4P50991 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CCT4P50991 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCT4P50991 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCT4P50991 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCT4P50991 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCT4P50991 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CCT4P50991 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.27■■□□□ 1.32
CCT4P50991 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.27■■□□□ 1.32
CCT4P50991 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCT4P50991 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCT4P50991 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CCT4P50991 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC23.27■■□□□ 1.32
CCT4P50991 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CCT4P50991 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCT4P50991 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CCT4P50991 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CCT4P50991 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CCT4P50991 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CCT4P50991 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CCT4P50991 PVRIG2P-201ENST00000435460 978 ntBASIC23.26■■□□□ 1.31
CCT4P50991 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.26■■□□□ 1.31
CCT4P50991 SPDYE13P-201ENST00000445314 798 ntBASIC23.26■■□□□ 1.31
CCT4P50991 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.26■■□□□ 1.31
CCT4P50991 AC079602.3-201ENST00000623931 403 ntBASIC23.26■■□□□ 1.31
CCT4P50991 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCT4P50991 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCT4P50991 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCT4P50991 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.26■■□□□ 1.31
CCT4P50991 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.26■■□□□ 1.31
CCT4P50991 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCT4P50991 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCT4P50991 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CCT4P50991 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC23.25■■□□□ 1.31
CCT4P50991 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCT4P50991 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCT4P50991 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCT4P50991 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCT4P50991 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCT4P50991 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCT4P50991 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCT4P50991 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.25■■□□□ 1.31
CCT4P50991 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCT4P50991 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.25■■□□□ 1.31
CCT4P50991 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.25■■□□□ 1.31
CCT4P50991 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.25■■□□□ 1.31
CCT4P50991 AC069148.1-201ENST00000608741 768 ntBASIC23.25■■□□□ 1.31
CCT4P50991 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.25■■□□□ 1.31
CCT4P50991 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCT4P50991 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCT4P50991 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms